Functional and Phylogenetic Ecology in R

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Release : 2014-03-26
Genre : Computers
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Book Rating : 423/5 ( reviews)

Functional and Phylogenetic Ecology in R - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Functional and Phylogenetic Ecology in R write by Nathan G. Swenson. This book was released on 2014-03-26. Functional and Phylogenetic Ecology in R available in PDF, EPUB and Kindle. Functional and Phylogenetic Ecology in R is designed to teach readers to use R for phylogenetic and functional trait analyses. Over the past decade, a dizzying array of tools and methods were generated to incorporate phylogenetic and functional information into traditional ecological analyses. Increasingly these tools are implemented in R, thus greatly expanding their impact. Researchers getting started in R can use this volume as a step-by-step entryway into phylogenetic and functional analyses for ecology in R. More advanced users will be able to use this volume as a quick reference to understand particular analyses. The volume begins with an introduction to the R environment and handling relevant data in R. Chapters then cover phylogenetic and functional metrics of biodiversity; null modeling and randomizations for phylogenetic and functional trait analyses; integrating phylogenetic and functional trait information; and interfacing the R environment with a popular C-based program. This book presents a unique approach through its focus on ecological analyses and not macroevolutionary analyses. The author provides his own code, so that the reader is guided through the computational steps to calculate the desired metrics. This guided approach simplifies the work of determining which package to use for any given analysis. Example datasets are shared to help readers practice, and readers can then quickly turn to their own datasets.

Phylogenetic Ecology

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Release : 2019-11-20
Genre : Science
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Book Rating : 50X/5 ( reviews)

Phylogenetic Ecology - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Phylogenetic Ecology write by Nathan G. Swenson. This book was released on 2019-11-20. Phylogenetic Ecology available in PDF, EPUB and Kindle. Over the past decade, ecologists have increasingly embraced phylogenetics, the study of evolutionary relationships among species. As a result, they have come to discover the field’s power to illuminate present ecological patterns and processes. Ecologists are now investigating whether phylogenetic diversity is a better measure of ecosystem health than more traditional metrics like species diversity, whether it can predict the future structure and function of communities and ecosystems, and whether conservationists might prioritize it when formulating conservation plans. In Phylogenetic Ecology, Nathan G. Swenson synthesizes this nascent field’s major conceptual, methodological, and empirical developments to provide students and practicing ecologists with a foundational overview. Along the way, he highlights those realms of phylogenetic ecology that will likely increase in relevance—such as the burgeoning subfield of phylogenomics—and shows how ecologists might lean on these new perspectives to inform their research programs.

Handbook of Trait-Based Ecology

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Release : 2021-03-11
Genre : Nature
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Book Rating : 915/5 ( reviews)

Handbook of Trait-Based Ecology - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Handbook of Trait-Based Ecology write by Francesco de Bello. This book was released on 2021-03-11. Handbook of Trait-Based Ecology available in PDF, EPUB and Kindle. Trait-based ecology is rapidly expanding. This comprehensive and accessible guide covers the main concepts and tools in functional ecology.

Phylogenetic Ecology

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Release : 2019-11-22
Genre : Science
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Book Rating : 64X/5 ( reviews)

Phylogenetic Ecology - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Phylogenetic Ecology write by Nathan G. Swenson. This book was released on 2019-11-22. Phylogenetic Ecology available in PDF, EPUB and Kindle. Over the past decade, ecologists have increasingly embraced phylogenetics, the study of evolutionary relationships among species. As a result, they have come to discover the field’s power to illuminate present ecological patterns and processes. Ecologists are now investigating whether phylogenetic diversity is a better measure of ecosystem health than more traditional metrics like species diversity, whether it can predict the future structure and function of communities and ecosystems, and whether conservationists might prioritize it when formulating conservation plans. In Phylogenetic Ecology, Nathan G. Swenson synthesizes this nascent field’s major conceptual, methodological, and empirical developments to provide students and practicing ecologists with a foundational overview. Along the way, he highlights those realms of phylogenetic ecology that will likely increase in relevance—such as the burgeoning subfield of phylogenomics—and shows how ecologists might lean on these new perspectives to inform their research programs.

Phylogenetic Comparative Methods in R

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Release : 2022-07-12
Genre : Science
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Book Rating : 044/5 ( reviews)

Phylogenetic Comparative Methods in R - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Phylogenetic Comparative Methods in R write by Liam J. Revell. This book was released on 2022-07-12. Phylogenetic Comparative Methods in R available in PDF, EPUB and Kindle. An authoritative introduction to the latest comparative methods in evolutionary biology Phylogenetic comparative methods are a suite of statistical approaches that enable biologists to analyze and better understand the evolutionary tree of life, and shed vital new light on patterns of divergence and common ancestry among all species on Earth. This textbook shows how to carry out phylogenetic comparative analyses in the R statistical computing environment. Liam Revell and Luke Harmon provide an incisive conceptual overview of each method along with worked examples using real data and challenge problems that encourage students to learn by doing. By working through this book, students will gain a solid foundation in these methods and develop the skills they need to interpret patterns in the tree of life. Covers every major method of modern phylogenetic comparative analysis in R Explains the basics of R and discusses topics such as trait evolution, diversification, trait-dependent diversification, biogeography, and visualization Features a wealth of exercises and challenge problems Serves as an invaluable resource for students and researchers, with applications in ecology, evolution, anthropology, disease transmission, conservation biology, and a host of other areas Written by two of today’s leading developers of phylogenetic comparative methods