A Practical Approach to Microarray Data Analysis

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Release : 2007-05-08
Genre : Science
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Book Rating : 153/5 ( reviews)

A Practical Approach to Microarray Data Analysis - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook A Practical Approach to Microarray Data Analysis write by Daniel P. Berrar. This book was released on 2007-05-08. A Practical Approach to Microarray Data Analysis available in PDF, EPUB and Kindle. In the past several years, DNA microarray technology has attracted tremendous interest in both the scientific community and in industry. With its ability to simultaneously measure the activity and interactions of thousands of genes, this modern technology promises unprecedented new insights into mechanisms of living systems. Currently, the primary applications of microarrays include gene discovery, disease diagnosis and prognosis, drug discovery (pharmacogenomics), and toxicological research (toxicogenomics). Typical scientific tasks addressed by microarray experiments include the identification of coexpressed genes, discovery of sample or gene groups with similar expression patterns, identification of genes whose expression patterns are highly differentiating with respect to a set of discerned biological entities (e.g., tumor types), and the study of gene activity patterns under various stress conditions (e.g., chemical treatment). More recently, the discovery, modeling, and simulation of regulatory gene networks, and the mapping of expression data to metabolic pathways and chromosome locations have been added to the list of scientific tasks that are being tackled by microarray technology. Each scientific task corresponds to one or more so-called data analysis tasks. Different types of scientific questions require different sets of data analytical techniques. Broadly speaking, there are two classes of elementary data analysis tasks, predictive modeling and pattern-detection. Predictive modeling tasks are concerned with learning a classification or estimation function, whereas pattern-detection methods screen the available data for interesting, previously unknown regularities or relationships.

Analyzing Microarray Gene Expression Data

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Release : 2005-02-18
Genre : Mathematics
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Book Rating : 125/5 ( reviews)

Analyzing Microarray Gene Expression Data - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Analyzing Microarray Gene Expression Data write by Geoffrey J. McLachlan. This book was released on 2005-02-18. Analyzing Microarray Gene Expression Data available in PDF, EPUB and Kindle. A multi-discipline, hands-on guide to microarray analysis of biological processes Analyzing Microarray Gene Expression Data provides a comprehensive review of available methodologies for the analysis of data derived from the latest DNA microarray technologies. Designed for biostatisticians entering the field of microarray analysis as well as biologists seeking to more effectively analyze their own experimental data, the text features a unique interdisciplinary approach and a combined academic and practical perspective that offers readers the most complete and applied coverage of the subject matter to date. Following a basic overview of the biological and technical principles behind microarray experimentation, the text provides a look at some of the most effective tools and procedures for achieving optimum reliability and reproducibility of research results, including: An in-depth account of the detection of genes that are differentially expressed across a number of classes of tissues Extensive coverage of both cluster analysis and discriminant analysis of microarray data and the growing applications of both methodologies A model-based approach to cluster analysis, with emphasis on the use of the EMMIX-GENE procedure for the clustering of tissue samples The latest data cleaning and normalization procedures The uses of microarray expression data for providing important prognostic information on the outcome of disease

Statistical Analysis of Gene Expression Microarray Data

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Release : 2003-03-26
Genre : Mathematics
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Book Rating : 236/5 ( reviews)

Statistical Analysis of Gene Expression Microarray Data - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Statistical Analysis of Gene Expression Microarray Data write by Terry Speed. This book was released on 2003-03-26. Statistical Analysis of Gene Expression Microarray Data available in PDF, EPUB and Kindle. Although less than a decade old, the field of microarray data analysis is now thriving and growing at a remarkable pace. Biologists, geneticists, and computer scientists as well as statisticians all need an accessible, systematic treatment of the techniques used for analyzing the vast amounts of data generated by large-scale gene expression studies

Microarray Data Analysis

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Release : 2022-12-15
Genre : Science
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Book Rating : 417/5 ( reviews)

Microarray Data Analysis - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Microarray Data Analysis write by Giuseppe Agapito. This book was released on 2022-12-15. Microarray Data Analysis available in PDF, EPUB and Kindle. This meticulous book explores the leading methodologies, techniques, and tools for microarray data analysis, given the difficulty of harnessing the enormous amount of data. The book includes examples and code in R, requiring only an introductory computer science understanding, and the structure and the presentation of the chapters make it suitable for use in bioinformatics courses. Written for the highly successful Methods in Molecular Biology series, chapters include the kind of key detail and expert implementation advice that ensures successful results and reproducibility. Authoritative and practical, Microarray Data Analysis is an ideal guide for students or researchers who need to learn the main research topics and practitioners who continue to work with microarray datasets.

Methods of Microarray Data Analysis

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Release : 2012-12-06
Genre : Science
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Book Rating : 738/5 ( reviews)

Methods of Microarray Data Analysis - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Methods of Microarray Data Analysis write by Simon M. Lin. This book was released on 2012-12-06. Methods of Microarray Data Analysis available in PDF, EPUB and Kindle. Microarray technology is a major experimental tool for functional genomic explorations, and will continue to be a major tool throughout this decade and beyond. The recent explosion of this technology threatens to overwhelm the scientific community with massive quantities of data. Because microarray data analysis is an emerging field, very few analytical models currently exist. Methods of Microarray Data Analysis is one of the first books dedicated to this exciting new field. In a single reference, readers can learn about the most up-to-date methods ranging from data normalization, feature selection and discriminative analysis to machine learning techniques. Currently, there are no standard procedures for the design and analysis of microarray experiments. Methods of Microarray Data Analysis focuses on two well-known data sets, using a different method of analysis in each chapter. Real examples expose the strengths and weaknesses of each method for a given situation, aimed at helping readers choose appropriate protocols and utilize them for their own data set. In addition, web links are provided to the programs and tools discussed in several chapters. This book is an excellent reference not only for academic and industrial researchers, but also for core bioinformatics/genomics courses in undergraduate and graduate programs.