RNA Structure Determination - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook RNA Structure Determination write by Douglas H. Turner. This book was released on 2016-09-24. RNA Structure Determination available in PDF, EPUB and Kindle. This volume provides protocols and procedures for determining and modeling RNA structure. Chapters guide the reader through protocols for RNA secondary structure prediction, single sequence modeling, Crumple, RNAstructure to model conserved secondary structures with multiple homologs, the prediction of bimolecular secondary structures with RNAstructure, STarMir, protocols for structure mapping, mapping data to constrain or restrain RNA secondary structure prediction with RNAstructure, unassigned NMR resonances, modeling protocols for Rosetta FARFAR, RNAComposer , ModeRNA, and MC-Fold. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and Practical, RNA Structure Determination: Methods and Protocols aims to ensure successful results in the further study of this vital field.
RNA 3D Structure Analysis and Prediction
RNA 3D Structure Analysis and Prediction - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook RNA 3D Structure Analysis and Prediction write by Neocles Leontis. This book was released on 2012-06-05. RNA 3D Structure Analysis and Prediction available in PDF, EPUB and Kindle. With the dramatic increase in RNA 3D structure determination in recent years, we now know that RNA molecules are highly structured. Moreover, knowledge of RNA 3D structures has proven crucial for understanding in atomic detail how they carry out their biological functions. Because of the huge number of potentially important RNA molecules in biology, many more than can be studied experimentally, we need theoretical approaches for predicting 3D structures on the basis of sequences alone. This volume provides a comprehensive overview of current progress in the field by leading practitioners employing a variety of methods to model RNA 3D structures by homology, by fragment assembly, and by de novo energy and knowledge-based approaches.
RNA Structure Prediction
RNA Structure Prediction - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook RNA Structure Prediction write by Risa Karakida Kawaguchi. This book was released on 2023-01-27. RNA Structure Prediction available in PDF, EPUB and Kindle. This book explores recent progress in RNA secondary, tertiary structure prediction, and its application from an expansive point of view. Because of advancements in experimental protocols and devices, the integration of new types of data as well as new analysis techniques is necessary, and this volume discusses additional topics that are closely related to RNA structure prediction, such as the detection of structure-disrupting mutations, high-throughput structure analysis, and 3D structure design. Written for the highly successful Methods in Molecular Biology series, chapters feature the kind of detailed implementation advice that leads to quality research results. Authoritative and practical, RNA Structure Prediction serves as a valuable guide for both experimental and computational RNA researchers.
RNA 3D Structure Analysis and Prediction
RNA 3D Structure Analysis and Prediction - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook RNA 3D Structure Analysis and Prediction write by Neocles Leontis. This book was released on 2012-06-05. RNA 3D Structure Analysis and Prediction available in PDF, EPUB and Kindle. With the dramatic increase in RNA 3D structure determination in recent years, we now know that RNA molecules are highly structured. Moreover, knowledge of RNA 3D structures has proven crucial for understanding in atomic detail how they carry out their biological functions. Because of the huge number of potentially important RNA molecules in biology, many more than can be studied experimentally, we need theoretical approaches for predicting 3D structures on the basis of sequences alone. This volume provides a comprehensive overview of current progress in the field by leading practitioners employing a variety of methods to model RNA 3D structures by homology, by fragment assembly, and by de novo energy and knowledge-based approaches.
RNA Sequence, Structure, and Function: Computational and Bioinformatic Methods
RNA Sequence, Structure, and Function: Computational and Bioinformatic Methods - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook RNA Sequence, Structure, and Function: Computational and Bioinformatic Methods write by Jan Gorodkin. This book was released on 2014-03-18. RNA Sequence, Structure, and Function: Computational and Bioinformatic Methods available in PDF, EPUB and Kindle. The existence of genes for RNA molecules not coding for proteins (ncRNAs) has been recognized since the 1950's, but until recently, aside from the critically important ribosomal and transfer RNA genes, most focus has been on protein coding genes. However, a long series of striking discoveries, from RNA's ability to carry out catalytic function, to discovery of riboswitches, microRNAs and other ribo-regulators performing critical tasks in essentially all living organisms, has created a burgeoning interest in this primordial component of the biosphere. However, the structural characteristics and evolutionary constraints on RNA molecules are very different from those of proteins, necessitating development of a completely new suite of informatic tools to address these challenges. In RNA Sequence, Structure, Function: Computational and Bioinformatic Methods, expert researchers in the field describe a substantial and relevant fraction of these methodologies from both practical and computational/algorithmic perspectives. Focusing on both of these directions addresses both the biologist interested in knowing more about RNA bioinformatics as well as the bioinformaticist interested in more detailed aspects of the algorithms. Written in the highly successful Methods in Molecular Biology series format, the chapters include the kind of detailed description and implementation advice that is crucial for getting optimal results. Thorough and intuitive, RNA Sequence, Structure, Function: Computational and Bioinformatic Methods aids scientists in continuing to study key methods and principles of RNA bioinformatics.
