Using R for Bayesian Spatial and Spatio-Temporal Health Modeling

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Release : 2021-04-28
Genre : Mathematics
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Book Rating : 702/5 ( reviews)

Using R for Bayesian Spatial and Spatio-Temporal Health Modeling - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Using R for Bayesian Spatial and Spatio-Temporal Health Modeling write by Andrew B. Lawson. This book was released on 2021-04-28. Using R for Bayesian Spatial and Spatio-Temporal Health Modeling available in PDF, EPUB and Kindle. Progressively more and more attention has been paid to how location affects health outcomes. The area of disease mapping focusses on these problems, and the Bayesian paradigm has a major role to play in the understanding of the complex interplay of context and individual predisposition in such studies of disease. Using R for Bayesian Spatial and Spatio-Temporal Health Modeling provides a major resource for those interested in applying Bayesian methodology in small area health data studies. Features: Review of R graphics relevant to spatial health data Overview of Bayesian methods and Bayesian hierarchical modeling as applied to spatial data Bayesian Computation and goodness-of-fit Review of basic Bayesian disease mapping models Spatio-temporal modeling with MCMC and INLA Special topics include multivariate models, survival analysis, missing data, measurement error, variable selection, individual event modeling, and infectious disease modeling Software for fitting models based on BRugs, Nimble, CARBayes and INLA Provides code relevant to fitting all examples throughout the book at a supplementary website The book fills a void in the literature and available software, providing a crucial link for students and professionals alike to engage in the analysis of spatial and spatio-temporal health data from a Bayesian perspective using R. The book emphasizes the use of MCMC via Nimble, BRugs, and CARBAyes, but also includes INLA for comparative purposes. In addition, a wide range of packages useful in the analysis of geo-referenced spatial data are employed and code is provided. It will likely become a key reference for researchers and students from biostatistics, epidemiology, public health, and environmental science.

Spatial and Spatio-temporal Bayesian Models with R - INLA

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Release : 2015-06-02
Genre : Mathematics
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Book Rating : 555/5 ( reviews)

Spatial and Spatio-temporal Bayesian Models with R - INLA - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Spatial and Spatio-temporal Bayesian Models with R - INLA write by Marta Blangiardo. This book was released on 2015-06-02. Spatial and Spatio-temporal Bayesian Models with R - INLA available in PDF, EPUB and Kindle. Spatial and Spatio-Temporal Bayesian Models with R-INLA provides a much needed, practically oriented & innovative presentation of the combination of Bayesian methodology and spatial statistics. The authors combine an introduction to Bayesian theory and methodology with a focus on the spatial and spatio-temporal models used within the Bayesian framework and a series of practical examples which allow the reader to link the statistical theory presented to real data problems. The numerous examples from the fields of epidemiology, biostatistics and social science all are coded in the R package R-INLA, which has proven to be a valid alternative to the commonly used Markov Chain Monte Carlo simulations

Bayesian Modeling of Spatio-Temporal Data with R

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Release : 2022-02-23
Genre : Mathematics
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Book Rating : 692/5 ( reviews)

Bayesian Modeling of Spatio-Temporal Data with R - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Bayesian Modeling of Spatio-Temporal Data with R write by Sujit Sahu. This book was released on 2022-02-23. Bayesian Modeling of Spatio-Temporal Data with R available in PDF, EPUB and Kindle. Applied sciences, both physical and social, such as atmospheric, biological, climate, demographic, economic, ecological, environmental, oceanic and political, routinely gather large volumes of spatial and spatio-temporal data in order to make wide ranging inference and prediction. Ideally such inferential tasks should be approached through modelling, which aids in estimation of uncertainties in all conclusions drawn from such data. Unified Bayesian modelling, implemented through user friendly software packages, provides a crucial key to unlocking the full power of these methods for solving challenging practical problems. Key features of the book: • Accessible detailed discussion of a majority of all aspects of Bayesian methods and computations with worked examples, numerical illustrations and exercises • A spatial statistics jargon buster chapter that enables the reader to build up a vocabulary without getting clouded in modeling and technicalities • Computation and modeling illustrations are provided with the help of the dedicated R package bmstdr, allowing the reader to use well-known packages and platforms, such as rstan, INLA, spBayes, spTimer, spTDyn, CARBayes, CARBayesST, etc • Included are R code notes detailing the algorithms used to produce all the tables and figures, with data and code available via an online supplement • Two dedicated chapters discuss practical examples of spatio-temporal modeling of point referenced and areal unit data • Throughout, the emphasis has been on validating models by splitting data into test and training sets following on the philosophy of machine learning and data science This book is designed to make spatio-temporal modeling and analysis accessible and understandable to a wide audience of students and researchers, from mathematicians and statisticians to practitioners in the applied sciences. It presents most of the modeling with the help of R commands written in a purposefully developed R package to facilitate spatio-temporal modeling. It does not compromise on rigour, as it presents the underlying theories of Bayesian inference and computation in standalone chapters, which would be appeal those interested in the theoretical details. By avoiding hard core mathematics and calculus, this book aims to be a bridge that removes the statistical knowledge gap from among the applied scientists.

Geospatial Health Data

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Release : 2019-11-26
Genre : Medical
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Book Rating : 150/5 ( reviews)

Geospatial Health Data - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Geospatial Health Data write by Paula Moraga. This book was released on 2019-11-26. Geospatial Health Data available in PDF, EPUB and Kindle. Geospatial health data are essential to inform public health and policy. These data can be used to quantify disease burden, understand geographic and temporal patterns, identify risk factors, and measure inequalities. Geospatial Health Data: Modeling and Visualization with R-INLA and Shiny describes spatial and spatio-temporal statistical methods and visualization techniques to analyze georeferenced health data in R. The book covers the following topics: Manipulate and transform point, areal, and raster data, Bayesian hierarchical models for disease mapping using areal and geostatistical data, Fit and interpret spatial and spatio-temporal models with the Integrated Nested Laplace Approximations (INLA) and the Stochastic Partial Differential Equation (SPDE) approaches, Create interactive and static visualizations such as disease maps and time plots, Reproducible R Markdown reports, interactive dashboards, and Shiny web applications that facilitate the communication of insights to collaborators and policy makers. The book features fully reproducible examples of several disease and environmental applications using real-world data such as malaria in The Gambia, cancer in Scotland and USA, and air pollution in Spain. Examples in the book focus on health applications, but the approaches covered are also applicable to other fields that use georeferenced data including epidemiology, ecology, demography or criminology. The book provides clear descriptions of the R code for data importing, manipulation, modeling and visualization, as well as the interpretation of the results. This ensures contents are fully reproducible and accessible for students, researchers and practitioners.

Spatio-Temporal Methods in Environmental Epidemiology

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Release : 2015-06-17
Genre : Mathematics
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Book Rating : 040/5 ( reviews)

Spatio-Temporal Methods in Environmental Epidemiology - read free eBook in online reader or directly download on the web page. Select files or add your book in reader. Download and read online ebook Spatio-Temporal Methods in Environmental Epidemiology write by Gavin Shaddick. This book was released on 2015-06-17. Spatio-Temporal Methods in Environmental Epidemiology available in PDF, EPUB and Kindle. Teaches Students How to Perform Spatio-Temporal Analyses within Epidemiological StudiesSpatio-Temporal Methods in Environmental Epidemiology is the first book of its kind to specifically address the interface between environmental epidemiology and spatio-temporal modeling. In response to the growing need for collaboration between statisticians and